PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS67518.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 105aa    MW: 12173.9 Da    PI: 9.8309
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS67518.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92.1e-095292954
                HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  EPS67518.1 52 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 92
                699*****************87.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.9514392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.68E-1548102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.15E-84997No hitNo description
Gene3DG3DSA:4.10.280.102.4E-1349104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-124998IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.9E-75292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010197Biological Processpolar nucleus fusion
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    Send to blast
DDDDPEDEEL GAMKEMMFKV AAMQPVDIDP STIHKPRRRN VRISDDPQSV AARHRRERIS  60
EKIRILQRLV PGGTKMDTAS MLDEAIRYVK FLKRQIRVLQ SSNNN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099758.11e-58PREDICTED: transcription factor HEC3
SwissprotO813132e-47IND_ARATH; Transcription factor IND
TrEMBLS8DWF91e-71S8DWF9_9LAMI; Uncharacterized protein (Fragment)
STRINGGLYMA05G32410.24e-56(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA75223101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.11e-48bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]